[4Fe-4S](peptide) library

Below is the list of custom synthesized peptides by Celtek Biosciences and Biomatik that we used for synthesizing [4Fe-4S]-maquettes and then studying their redox properties and biomimetic activity.

Bioinspired Radical SAM Peptides

CVHECPGCY (RNR-AE) – Target 1B
Mw =1010.16 g mol-1 pI =5.24
εred. =1490 M-1 cm-1 instability index =70.73
charge =-2 (at pH 8) more info …
CPEDCKYC (BioB) – BioB_M
Mw =960.10 g mol-1 pI =4.37
εred. =1490 M-1 cm-1 instability index =78.62
charge =-1 (at pH 8) more info …
CNLRCSYC (MoaA) – RadSAM_M
Mw =961.14 g mol-1 pI =7.96
εred. =1490 M-1 cm-1 instability index =32.83
charge =neutral (at pH 8) more info …

Nascent Radical SAM Maquettes

CIAGCGAC – RadSAM_FdM8-AC
Mw =695.85 g mol-1 pI =5.5
εred. =est. M-1 cm-1 instability index =53.06
charge =-1 (at pH 8) more info …
CGGGCGGC – RadSAM-FdM-7-Gly
Mw =612.69 g mol-1 pI =5.5
εred. =est. M-1 cm-1 instability index =55.02
charge =-1 (at pH 8) more info …
CIAGCGACYRadSAM_FdM8
Mw =860.03 g mol-1 pI =5.50
εred. =1490 M-1 cm-1 instability index =48.28
charge =-1 (at pH 8) more info …
CGGGCGGCY – Target-0-Gly
Mw =775.87 g mol-1 pI =5.50
εred. =1490 M-1 cm-1 instability index =50.02
charge =-1 (at pH 8) more info …
CGGGCGYC – Nat-RadSAM
Mw =718.82 g mol-1 pI =5.50
εred. =1490 M-1 cm-1 instability index =28.99
charge =-1 (at pH 8) more info …

Nascent Ferredoxin Peptides

CIACGAC – FdM-7
Mw =639.80 g mol-1 pI =5.50
εred. =est. M-1 cm-1 instability index =121.99
charge =-1 (at pH 8) more info …
CGGCGGC- FdM-7-Gly
Mw =555.64 g mol-1 pI =5.50
εred. =est. M-1 cm-1 instability index =43.83
charge =-1 (at pH 8) more info …
CIACGACY – FdM-7-Tyr
Mw =802.99 g mol-1 pI =5.50
εred. =1490 M-1 cm-1 instability index =107.99
charge =-1 (at pH 8) more info …
CGGCGGCY – FdM-7-Gly-Tyr
Mw =718.83 g mol-1 pI =5.50
εred. =1490 M-1 cm-1 instability index =39.6
charge =-1 (at pH 8) more info …

Ferredoxin Control Peptides

KLCEGGCIACGACGGW – FdM
Mw =1527.81 g mol-1 pI =5.97
εred. =5500 M-1 cm-1 instability index =76.83
charge =-1 (at pH 8) more info …
KLAEGGCIACGACGGW – FdM-1A
Mw =1495.75 g mol-1 pI =5.98
εred. =5500 M-1 cm-1 instability index =76.83
charge =-1 (at pH 8) more info …

Note 1: Isoelectric point (pI) corresponds to a pH value at which net charge of protein is zero.

Note 2: Given that the pKa of the N-terminal is expected to be in the range of 6.8 and 9.1 [10.1038/srep43748], we considered the N-terminal to be non-protonated at pH = 8.0.

Note 3: Molar extinction coefficients (ε) for peptides without aromatic residues were estimated from the additivity of peptide carbonyl charge transfer bands at λ = 205 nm [PubMed 14907727, 10.1002/pro.2253].

Note 4: The instability index provides an estimate of the stability of your protein in a test tube [10.1093/protein/4.2.155]. A protein with instability index that is smaller than 40, is predicted as stable; a value above 40 predicts that the protein may be unstable.